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Industry InsightsJanuary 7, 202613 min read

Top Cerner (Oracle Health) Alternatives 2026: Best Hospital Software Compared

Looking for Cerner alternatives after the Oracle acquisition? Compare the best hospital management systems including HospitalOS, MEDITECH, and eClinicalWorks. Find affordable HMS options.

C

Charles Bah

CEO

Top Cerner (Oracle Health) Alternatives 2026: Best Hospital Software Compared

Since Oracle's acquisition of Cerner in 2022, many hospitals have been evaluating alternatives. Concerns about pricing changes, product direction, and support have driven healthcare facilities to explore other options. This guide compares the top Cerner alternatives available in 2026.

Why Hospitals Are Looking for Cerner Alternatives

The Oracle acquisition has raised several concerns:

  • Price Uncertainty: Oracle's enterprise pricing model concerns
  • Product Changes: Uncertainty about Cerner product roadmap
  • Support Quality: Reports of support changes post-acquisition
  • Contract Terms: New contract requirements
  • Cloud Migration: Push toward Oracle Cloud infrastructure

Top Cerner Alternatives for 2026

1. HospitalOS by MedSoftwares (Best Value Alternative)

HospitalOS provides comprehensive hospital management at a fraction of Cerner's cost, making it ideal for hospitals seeking to reduce expenses while maintaining functionality.

Key Advantages Over Cerner:

  • Pricing: $999-$2,999 one-time vs Cerner's $millions
  • Implementation: 2-4 weeks vs 6-18 months
  • No Lock-in: Own your license forever
  • Offline Capable: Works without internet
  • Global Support: 40+ countries, local languages

Modules Included:

  • Electronic Medical Records (EMR)
  • OPD and IPD Management
  • Emergency Department
  • Laboratory Information System (LIS)
  • Radiology Information System (RIS)
  • Pharmacy Management
  • Billing and Insurance Claims
  • HR and Payroll
  • Telemedicine
  • 25+ total modules

Best For: Hospitals of all sizes wanting dramatic cost reduction.

2. Epic Systems

The market leader often considered for Cerner replacements at large hospitals.

  • Pricing: $500K - $5M+ implementation
  • Market: Large health systems
  • Strength: Comprehensive functionality, market leadership
  • Consideration: Similar cost profile to Cerner

Best For: Large health systems with substantial budgets.

3. MEDITECH Expanse

Web-based EHR targeting community hospitals.

  • Pricing: Lower than Cerner/Epic
  • Target: Community and rural hospitals
  • Deployment: Cloud and on-premise options

Best For: Community hospitals wanting established vendor.

4. Athenahealth

Cloud-based platform with strong RCM services.

  • Pricing: Percentage of collections model
  • Focus: Ambulatory and outpatient
  • Strength: Revenue cycle management

Best For: Ambulatory settings, physician practices.

5. eClinicalWorks

Comprehensive EHR for ambulatory care.

  • Pricing: ~$449/provider/month
  • Users: 850,000+ healthcare professionals
  • Features: EHR, PM, population health

Best For: Multi-specialty groups, large practices.

6. Allscripts

Healthcare IT solutions for various settings.

  • Options: Sunrise (inpatient), TouchWorks (ambulatory)
  • Market: Mid-size hospitals and practices
  • Integration: Strong interoperability focus

Best For: Organizations prioritizing interoperability.

7. NextGen Healthcare

Specialty-focused EHR and practice management.

  • Focus: Specialty practices
  • Features: Specialty-specific workflows
  • Market: Ambulatory specialty care

Best For: Specialty practices and ASCs.

HospitalOS vs Cerner Feature Comparison

FeatureHospitalOSCerner (Oracle Health)
Starting Price$999 one-time$500,000+
Annual CostOptional $199-499$100,000+
Implementation2-4 weeks6-18 months
EMR/EHRYesYes
CPOEYesYes
Laboratory (LIS)IncludedIncluded
Radiology (RIS)IncludedIncluded
PharmacyIncludedIncluded
BillingIncludedIncluded
Offline ModeYesNo
Global Availability40+ countriesLimited markets
Vendor Lock-inNoneHigh

Migration from Cerner to HospitalOS

MedSoftwares offers comprehensive migration support:

Data Migration

  • Patient demographics and records
  • Historical encounters and notes
  • Laboratory results
  • Medication records
  • Billing history
  • Scheduling data

Migration Process

    • Assessment: Evaluate current Cerner setup and data
    • Planning: Create detailed migration plan
    • Data Export: Extract data from Cerner
    • Data Mapping: Map Cerner fields to HospitalOS
    • Import: Load data into HospitalOS
    • Validation: Verify data accuracy
    • Training: Staff training on new system
    • Go-Live: Transition to HospitalOS

Timeline

  • Small hospital (under 50 beds): 2-4 weeks
  • Medium hospital (50-150 beds): 4-8 weeks
  • Large hospital (150+ beds): 8-12 weeks

Cost Savings Analysis

Typical Cerner Costs (100-bed Hospital)

  • Implementation: $2,000,000
  • Annual maintenance: $400,000
  • 5-year total: $4,000,000

HospitalOS Costs (Same Hospital)

  • License: $2,999
  • Annual maintenance: $499 x 5 = $2,495
  • 5-year total: $5,494

5-Year Savings: $3,994,506

Common Questions

Can HospitalOS match Cerner's functionality?

HospitalOS includes 25+ modules covering all core hospital operations. While Cerner has more specialized modules for very large health systems, HospitalOS provides all essential functionality that 95% of hospitals need.

What about interoperability?

HospitalOS supports HL7 and FHIR standards for healthcare data exchange, enabling integration with labs, insurance systems, and other healthcare applications.

Is training difficult?

HospitalOS has a modern, intuitive interface. Most users are productive within 1-2 days. Free training is included with every implementation.

Conclusion

The Oracle acquisition of Cerner has created uncertainty for many hospitals. HospitalOS offers a compelling alternative with 99.9% cost savings, faster implementation, and freedom from vendor lock-in. Whether you're a small clinic or a large hospital, HospitalOS can deliver the functionality you need at a price you can afford. Contact MedSoftwares today for a free demo and migration assessment.

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